甘菊3个ClSCL6基因的克隆及表达分析
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北京市农林科学院科研创新能力专项(KJCX20200211,KJCX20200112)


Cloning and Expression of Three ClSCL6 Genes from Chrysanthemum lavandulifolium
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    摘要:

    GRAS家族HAM亚家族基因是维持植物茎端分生组织(shoot apical meristem,SAM)未分化状态的重要因子,并影响着植物的成花转化进程。该研究基于转录组数据中甘菊(Chrysanthemum lavandulifolium)HAM亚家族基因同源序列设计引物,利用RTPCR技术从甘菊中克隆得到3个HAM类基因。序列分析结果表明,所克隆的3个基因开放阅读框长度分别为1 845、1 479和1 881 bp,分别编码614、492和626个氨基酸。Blastp分析显示,3个基因的编码蛋白均含有典型HAM亚家族蛋白特征,并与菊科植物黄花蒿(Artemisia annua)SCL6蛋白具有较高的一致性,分别达到了94.39%、91.90%和94.27%。进一步分析表明,3个基因的编码蛋白与所有拟南芥GRAS家族中的SCL6蛋白进化关系最近,故将其分别命名为ClSCL6a、ClSCL6b和ClSCL6c。荧光定量分析显示,3个ClSCL6基因均在甘菊茎中表达量最高,而在根和花中表达量普遍较低。在不同发育时期的花器官中,3个ClSCL6基因均有表达,其中ClSCL6a在管状花花粉散开前达到表达高峰,ClSCL6b和ClSCL6c则在小花蕾时期表达量最高,在其他时期表达水平差异不大。该研究结果为进一步研究ClSCL6在菊花成花转化过程中的功能奠定了基础。

    Abstract:

    HAM subfamily genes of the GRAS family are important regulators for maintaining the undifferentiated state of shoot apical meristem (SAM), and affect the process of floral transition process in plants. In this study, based on the homologous sequences of HAM subfamily genes from a transcriptome dataset, three HAMlike genes were cloned from Chrysanthemum lavandulifolium by RTPCR technology. Sequence analysis showed that the open reading frames (ORF) of the three genes were 1 845, 1 479 and 1 881 bp in length, encoding 614, 492 and 626 amino acids, respectively. Blastp analysis showed that the coding products of the three genes contain typical structures of HAM subfamily, and show high identity with the SCL6 protein of Artemisia annua, which reach up to 94.39%, 91.90%, and 94.27%, respectively. Further analysis showed that amino acid sequences translated by the three genes had the closest evolutionary relationship to SCL6 in all Arabidopsis GRAS family members, so they were named as ClSCL6a, ClSCL6b, ClSCL6c, respectively. Fluorescence quantitative analysis showed that the three genes were highest expressed in the stems of C. lavandulifolium, and generally with low expression level in roots and flowers. In floral organs of different development stages, all the three ClSCL6 genes were expressed. ClSCL6a and ClSCL6c reached their expression peak before the pollinating period, while ClSCL6b had the highest expression level in the period of small flower buds. This study laid the foundation for further studying on the role of ClSCL6 in floral transformation of C. lavandulifolium.

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刘 佳,陈东亮,黄丛林,等.甘菊3个ClSCL6基因的克隆及表达分析[J].西北植物学报,2020,40(11):1847-1854

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  • 在线发布日期: 2020-12-11
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