紫苏硬脂酰ACP 脱氢酶基因家族鉴定及表达分析
作者:
作者单位:

作者简介:

通讯作者:

中图分类号:

基金项目:

国家青年科学基金(31201266);


Identification and Expression Analysis of StearoylACP Desaturase (PfSAD) Gene Family in Perilla
Author:
Affiliation:

Fund Project:

  • 摘要
  • |
  • 图/表
  • |
  • 访问统计
  • |
  • 参考文献
  • |
  • 相似文献
  • |
  • 引证文献
  • |
  • 资源附件
  • |
  • 文章评论
    摘要:

    硬脂酰ACP脱氢酶(SAD)催化硬脂酸脱氢生成油酸,是形成不饱和脂肪酸的关键酶。该研究从紫苏转录组数据库中筛选鉴定紫苏硬脂酰ACP脱氢酶(PfSAD)家族基因,并进行生物信息学分析及保守功能域分析,用qRTPCR技术检测PfSADs各成员在不同组织中的表达特性,以探讨PfSAD家族基因在调控种子脂肪酸组分中的作用,为紫苏脂肪酸组分的遗传改良提供基因元件。结果显示:(1)从该课题组前期自测的紫苏转录组数据库中共检测出6个PfSAD家族基因,其编码蛋白的氨基酸长度介于367~396 aa之间,均具有SAD的保守结构域和二铁中心,预测其基因编码蛋白均定位于叶绿体。(2)多序列比对结果显示,紫苏PfSADs蛋白序列与拟南芥、蓖麻及可可等植物的SAD蛋白序列相似性均在50%以上;系统进化分析显示,6个紫苏SAD蛋白被分为3个亚组,其中第一个亚组包含PfSAD1,第二亚组包含PfSAD2、PfSAD3,第三亚组包含PfSAD4、PfSAD5和PfSAD6。(3)实时荧光定量PCR分析发现,PfSADs各成员在‘晋紫苏1号’不同组织中的表达量差异显著,其中PfSAD1主要在叶中表达,PfSAD2、PfSAD3、PfSAD4和PfSAD5在种子中表达量较高,PfSAD6在花中具有显著表达优势。 研究表明,PfSADs具有典型的保守基序及催化SAD的活性中心,其各成员在不同的组织中高表达,推测这6个基因均参与了硬脂酰ACP(C18∶0ACP)脱氢生成油酰基ACP(Δ9C18∶1ACP)的过程,在紫苏油脂合成代谢过程中发挥重要作用。

    Abstract:

    Stearoylacyl carrier protein desaturase (SAD) catalyzes the dehydrogenation of stearic acid to oleic acid, which is the key enzyme to form unsaturated fatty acids. The Perilla frutescens stearoylacyl carrier protein dehydrogenase (PfSAD) family genes were screened and identified from the transcriptome database of perilla, and bioinformatics analysis and conserved functional domain analysis were carried out. The expression characteristic of each member of PfSADs in different tissues were detected by qRTPCR. So as to explore the role of PfSAD family genes in regulating seed fatty acid components, and provide gene elements for the genetic improvement of fatty acid components of P. frutescens. The results showed that: (1) six PfSAD family genes were detected from P. frutescens transcriptome database tested by our research group in the early stage, and the amino acid lengths of the encoded proteins were between 367 and 396 amino acids. They all had the conserved domain and diiron center of SAD, and the encoded proteins were all located in the chloroplast. (2) The results of multiple sequence alignment showed that the protein sequences of PfSADs had more than 50% homology with the SAD protein sequence of Arabidopsis thaliana, Ricinus communis and Theobroma cacao L.; Phylogenetic tree analysis showed that six PfSADs proteins belonged to three subgroups, respectively, among which the first subgroup contained PfSAD1, the second subgroup contained PfSAD2 and PfSAD3, and the third subgroup contained PfSAD4, PfSAD5 and PfSAD6. (3) Real time quantitative PCR analysis showed that there were significant differences of the expression levels of PfSAD members in different tissues of ‘JinZisu 1’, in which PfSAD1 is mainly expressed in leaves, the expression levels of PfSAD2, PfSAD3, PfSAD4 and PfSASD5 were higher in seeds, and PfSAD6 has a significant expression advantage in flowers. The results show that PfSADs have typical conserved motifs and active center that catalyze SAD, and their members are highly expressed in different tissues, It suggested that all these 6 genes involved in the formation of oleoylACP derived from the dehydrogenation of stearoylACP and play a key role in the process of P. frutescens oil synthesis and metabolism. The study provides an important reference for further exploring the role of PfSAD family genes in regulating seed fatty acid components.

    参考文献
    相似文献
    引证文献
引用本文

邢 志,董书言,王 超,等.紫苏硬脂酰ACP 脱氢酶基因家族鉴定及表达分析[J].西北植物学报,2022,42(1):57-65

复制
分享
文章指标
  • 点击次数:
  • 下载次数:
  • HTML阅读次数:
  • 引用次数:
历史
  • 收稿日期:
  • 最后修改日期:
  • 录用日期:
  • 在线发布日期: 2022-01-28
  • 出版日期:

微信公众号二维码

手机版网站二维码